NEET-PG 2012 - Biochemistry Practice Questions

Q: At which step in glycolysis is NADH produced during the oxidation of glyceraldehyde-3-phosphate?

Glyceraldehyde-3-phosphate dehydrogenase. ***Glyceraldehyde-3-phosphate dehydrogenase*** - This enzyme catalyzes the oxidation and **phosphorylation** of glyceraldehyde-3-phosphate, producing **1,3-bisphosphoglycerate**. - During this reaction, **NAD+ is reduced to NADH**, which is a crucial step for energy production. *Pyruvate kinase* - This enzyme catalyzes the final step of glycolysis, transferring a phosphate group from **phosphoenolpyruvate** to ADP, forming ATP and pyruvate. - This step involves **substrate-level phosphorylation** for ATP production, not NADH. *Enolase* - This enzyme catalyzes the dehydration of **2-phosphoglycerate** to form **phosphoenolpyruvate (PEP)**. - This reaction involves the removal of a water molecule and does not produce NADH. *PFK-1* - **Phosphofructokinase-1 (PFK-1)** catalyzes the phosphorylation of fructose-6-phosphate to **fructose-1,6-bisphosphate**. - This is an ATP-consuming and a crucial regulatory step in glycolysis, but it does not involve NADH production.

Q: Enzyme causing covalent bond cleavage without hydrolysis ?

Lyase. ***Lyase*** - **Lyases** are enzymes that catalyze the cleavage of **covalent bonds** (C-C, C-O, C-N, and others) by means other than hydrolysis or oxidation, often creating a new double bond or a ring structure. - They remove groups from substrates to form double bonds, or conversely, add groups to double bonds. - **Examples:** Aldolase (cleaves C-C bonds in glycolysis), carbonic anhydrase (reversible cleavage of C-O bond), fumarase (C-C bond cleavage in TCA cycle). *Ligase* - **Ligases** are enzymes that join two large molecules by forming a new chemical bond, usually accompanied by the **hydrolysis of ATP**. - They are involved in synthesis reactions, not the cleavage of bonds. *Hydrolase* - **Hydrolases** specifically catalyze the hydrolysis of a chemical bond, involving the **addition of water** across the bond. - They break down large molecules into smaller ones using water - this is the key difference from lyases. *Transferase* - **Transferases** catalyze the transfer of a **functional group** from one molecule (the donor) to another (the acceptor). - They do not cause covalent bond cleavage without hydrolysis but rather move existing groups between molecules.

Q: All are activated by insulin except?

Hormone sensitive lipase. ***Hormone sensitive lipase*** - **Insulin** is an **anabolic hormone** that promotes energy storage; it **inhibits** hormone-sensitive lipase (HSL) activity which is responsible for **fat breakdown (lipolysis)**. - When insulin levels are high, the body stores fat rather than breaks it down, thus **decreasing** HSL activity. *Lipoprotein lipase* - **Insulin activates lipoprotein lipase (LPL)**, an enzyme that breaks down triglycerides in **chylomicrons** and **VLDL** into fatty acids for storage in adipose tissue. - This activation promotes the uptake of fatty acids into fat cells, aligning with insulin's role in **energy storage**. *Pyruvate kinase* - **Insulin activates pyruvate kinase** in glycolysis, promoting the conversion of **phosphoenolpyruvate to pyruvate**. - This enzyme's activation enhances glucose utilization and energy production following a meal when insulin levels are high. *Acetyl-CoA carboxylase* - **Insulin activates acetyl-CoA carboxylase (ACC)**, the **rate-limiting enzyme in fatty acid synthesis**. - Activation of ACC leads to the production of **malonyl-CoA**, which commits acetyl-CoA to fatty acid synthesis, storing excess energy as fat.

Q: In which condition is the utilization of pyruvate in tissues decreased?

Beriberi. ***Beriberi*** - Beriberi is caused by **thiamine (vitamin B1) deficiency**, which is a crucial cofactor for the **pyruvate dehydrogenase complex (PDH)**. - A dysfunctional PDH enzyme leads to a decreased conversion of **pyruvate to acetyl-CoA**, thus **decreasing pyruvate utilization** and causing its accumulation. *Pernicious anemia* - This condition is caused by a deficiency in **vitamin B12 (cobalamin)**, typically due to a lack of intrinsic factor, leading to **megaloblastic anemia**. - While vitamin B12 is essential for various metabolic pathways, it does not directly impair the utilization of **pyruvate** by PDH. *Scurvy* - Scurvy results from **vitamin C (ascorbic acid) deficiency**, which is essential for collagen synthesis and acts as an antioxidant. - Vitamin C deficiency does not directly impact the activity of the **pyruvate dehydrogenase complex** or the utilization of pyruvate. *Pellagra* - Pellagra is caused by a deficiency in **niacin (vitamin B3)**, or its precursor, tryptophan. - Niacin is a component of **NAD+ and NADP+**, which are crucial coenzymes in many metabolic reactions, but its deficiency does not primarily manifest as decreased **pyruvate utilization**.

Q: Which enzyme is deficient in Isovaleric acidemia?

Isovaleryl CoA dehydrogenase. ***Isovaleryl CoA dehydrogenase*** - **Isovaleric acidemia** is an **autosomal recessive** metabolic disorder caused by a deficiency in the enzyme **isovaleryl-CoA dehydrogenase** - This enzyme is crucial for the metabolism of **leucine**, a branched-chain amino acid, leading to the accumulation of toxic byproducts like **isovaleryl-CoA** and **isovaleric acid** - Characteristic **sweaty feet odor** due to isovaleric acid accumulation *Phenylalanine hydroxylase* - A deficiency in **phenylalanine hydroxylase** is responsible for **phenylketonuria (PKU)**, a different metabolic disorder involving the metabolism of **phenylalanine** - This enzyme converts **phenylalanine to tyrosine**, and its deficiency leads to the accumulation of phenylalanine and its metabolites, causing neurological damage if untreated *Arginase* - A deficiency in **arginase** causes **argininemia (hyperargininemia)**, which is a disorder of the **urea cycle** - This enzyme converts **arginine into urea and ornithine**, and its deficiency leads to the buildup of arginine and ammonia in the blood, causing neurological symptoms and developmental delay *Methylmalonyl CoA mutase* - A deficiency in **methylmalonyl CoA mutase** causes **methylmalonic acidemia**, another organic acidemia distinct from isovaleric acidemia - This disorder involves **propionate metabolism** and can present with metabolic acidosis, but affects a different metabolic pathway than leucine catabolism

Q: Neonatal tyrosinemia is due to deficiency of which enzyme?

Hydroxyphenyl pyruvate hydroxylase. ***Hydroxyphenyl pyruvate hydroxylase*** - **Neonatal (transient) tyrosinemia** is caused by delayed maturation or deficiency of **hydroxyphenylpyruvate hydroxylase** (also called 4-hydroxyphenylpyruvate dioxygenase or HPPD). - This enzyme converts 4-hydroxyphenylpyruvate to homogentisic acid in tyrosine catabolism. - Common in **premature infants** and newborns, leading to elevated tyrosine levels in blood. - The condition is **benign and self-limiting**, usually resolving with **vitamin C supplementation** or as the enzyme matures. - Note: Severe hereditary deficiency of this enzyme causes **tyrosinemia type III**, a distinct and rare disorder. *Fumarylacetoacetate hydroxylase* - Deficiency of **fumarylacetoacetate hydroxylase (FAH)** causes **tyrosinemia type I** (hepatorenal tyrosinemia), NOT neonatal tyrosinemia. - This is a severe hereditary disorder with liver failure, renal tubular dysfunction, and accumulation of toxic metabolites like succinylacetone. - Distinct from the benign transient neonatal form. *Tyrosine transaminase* - Deficiency of **tyrosine transaminase** (tyrosine aminotransferase) causes **tyrosinemia type II** (Richner-Hanhart syndrome). - Presents with corneal ulcers, palmoplantar hyperkeratosis, and sometimes intellectual disability. *Tyrosinase* - Deficiency of **tyrosinase** causes **albinism**, characterized by lack of melanin pigment in skin, hair, and eyes. - Not involved in tyrosine catabolism but in melanin synthesis.

Q: Which will activate carbamoyl phosphate synthase I?

N-acetyl glutamate. **N-acetyl glutamate** - **N-acetyl glutamate** is an **allosteric activator** of **carbamoyl phosphate synthase I (CPS I)**, which is the mitochondrial enzyme that catalyzes the first committed step of the **urea cycle**. - Its synthesis is stimulated by high levels of **arginine**, linking nitrogen load to urea production. *Acetyl-CoA* - Acetyl-CoA is a common **substrate** and **product** in various metabolic pathways, but it is not a direct activator of CPS I. - It is a precursor for the synthesis of **N-acetyl glutamate**, but does not activate CPS I directly. *Ornithine* - **Ornithine** is a key intermediate of the **urea cycle**, but it does not directly activate CPS I. - It combines with carbamoyl phosphate (the product of CPS I) in the second step of the urea cycle to form citrulline. *ATP* - **ATP** is a **substrate** used by CPS I to provide energy for the synthesis of carbamoyl phosphate. - While essential for the reaction, ATP itself does not act as an allosteric activator of the enzyme.

Q: Which amino acid requires ascorbic acid for its formation in the body?

Hydroxyproline. ***Hydroxyproline*** - **Ascorbic acid (Vitamin C)** is an essential cofactor for **prolyl hydroxylase** and **lysyl hydroxylase** enzymes - These enzymes catalyze the **post-translational hydroxylation** of proline and lysine residues within collagen chains to form hydroxyproline and hydroxylysine - This hydroxylation is crucial for **stabilization of the collagen triple helix** structure - Hydroxyproline is formed by **modification of proline after incorporation into collagen**, not as a free amino acid - **Scurvy** (Vitamin C deficiency) results in defective collagen due to inadequate hydroxyproline formation *Lysine* - Lysine is an **essential amino acid** obtained from diet - Does not require ascorbic acid for its synthesis or formation - While lysine residues in collagen can be hydroxylated (forming hydroxylysine), the question asks about the amino acid whose formation requires Vitamin C *Cysteine* - Cysteine is a **sulfur-containing amino acid** synthesized from methionine via transsulfuration pathway - Its synthesis does not involve ascorbic acid *Proline* - Proline is a **non-essential amino acid** synthesized from glutamate - **Proline synthesis does not require ascorbic acid** - Proline serves as the precursor that gets hydroxylated to hydroxyproline within collagen

Q: Enzymes of glycolysis are found in:

Cytosol. ***Cytosol*** - Glycolysis is a metabolic pathway that occurs in the **cytosol** of cells. - All the enzymes required for the conversion of glucose to pyruvate are freely dissolved in the **cytoplasm**. *Cell membrane* - The cell membrane is primarily involved in **regulating the passage of substances** into and out of the cell, as well as cell signaling. - Glycolytic enzymes are not associated with the cell membrane. *Mitochondria* - Mitochondria are the primary site of **oxidative phosphorylation** and the **citric acid cycle**, not glycolysis. - While pyruvate (the end product of glycolysis) moves into the mitochondria for further metabolism, the initial glycolytic steps do not occur there. *Ribosomes* - Ribosomes are responsible for **protein synthesis** (translation). - They do not contain enzymes for metabolic pathways like glycolysis.

Question 1

At which step in glycolysis is NADH produced during the oxidation of glyceraldehyde-3-phosphate?

Accepted Answer

Glyceraldehyde-3-phosphate dehydrogenase

Answer

Pyruvate kinase

Answer

Enolase

Answer

PFK-1

Question 2

Enzyme causing covalent bond cleavage without hydrolysis ?

Accepted Answer

Lyase

Answer

Ligase

Answer

Hydrolase

Answer

Transferase

Question 3

All are activated by insulin except?

Accepted Answer

Hormone sensitive lipase

Answer

Lipoprotein lipase

Answer

Pyruvate kinase

Answer

Acetyl-CoA carboxylase

Question 4

In which condition is the utilization of pyruvate in tissues decreased?

Accepted Answer

Beriberi

Answer

Pernicious anemia

Answer

Scurvy

Answer

Pellagra

Question 5

Which enzyme is deficient in Isovaleric acidemia?

Accepted Answer

Isovaleryl CoA dehydrogenase

Answer

Phenylalanine hydroxylase

Answer

Arginase

Answer

Methylmalonyl CoA mutase

Question 6

Neonatal tyrosinemia is due to deficiency of which enzyme?

Accepted Answer

Hydroxyphenyl pyruvate hydroxylase

Answer

Tyrosine transaminase

Answer

Fumarylacetoacetate hydroxylase

Answer

Tyrosinase

Question 7

Which will activate carbamoyl phosphate synthase I?

Accepted Answer

N-acetyl glutamate

Answer

ATP

Answer

Acetyl-CoA

Answer

Ornithine

Question 8

What metabolic changes occur during overnight fasting?

Accepted Answer

Glucose production increases

Answer

Blood glucose decreases slightly

Answer

Fat breakdown increases

Answer

Ketone levels rise slightly

Question 9

Which amino acid requires ascorbic acid for its formation in the body?

Accepted Answer

Hydroxyproline

Answer

Lysine

Answer

Cysteine

Answer

Proline

Question 10

Enzymes of glycolysis are found in:

Accepted Answer

Cytosol

Answer

Cell membrane

Answer

Mitochondria

Answer

Ribosomes

NEET-PG 2012 — Biochemistry