NEET-PG 2012 - Biochemistry Practice Questions

Q: Which of the following pairs of compounds has the highest standard reduction potential?

Fe³⁺/Fe²⁺. ***Fe³⁺/Fe²⁺*** - The **Fe³⁺/Fe²⁺ couple** has a **standard reduction potential (E'0)** of **+0.77 V**, making it the highest among the given options. - A higher positive E'0 indicates a stronger tendency for the oxidized form to accept electrons and be reduced. *NADH/NAD+* - The **NADH/NAD+ couple** has a **standard reduction potential** of **-0.32 V**, indicating it is a strong reducing agent. - Its negative reduction potential means it readily donates electrons during metabolic processes. *Succinate/Fumarate* - The **succinate/fumarate couple** has a **standard reduction potential** of **+0.03 V**. - This pair is involved in the **TCA cycle**, where succinate is oxidized to fumarate, releasing electrons. *Ubiquinone/Ubiquinol* - The **ubiquinone/ubiquinol couple** has a **standard reduction potential** varying around **+0.05 to +0.10 V**, depending on the specific state. - It acts as a mobile electron carrier in the **electron transport chain**, accepting electrons from NADH and FADH2.

Q: Which of the following substances does not inhibit glycolysis?

Fluoroacetate. ***Fluoroacetate*** - **Fluoroacetate** is not a direct inhibitor of glycolysis. Instead, it is metabolized to **fluorocitrate**, which then acts as an inhibitor of **aconitase** in the **Krebs cycle (TCA cycle)**, thereby affecting cellular respiration at a later stage. - Its primary role in metabolic inhibition is within the **mitochondria**, impacting energy production via the TCA cycle rather than the glycolytic pathway. *Fluoride* - **Fluoride** is a known inhibitor of **enolase**, an enzyme in the penultimate step of glycolysis. - It forms a complex with **magnesium** and **phosphate** to block the active site of enolase, preventing the conversion of 2-phosphoglycerate to phosphoenolpyruvate. *Arsenite* - **Arsenite** inhibits glycolysis by targeting enzymes containing **sulfhydryl (–SH) groups**, particularly **glyceraldehyde-3-phosphate dehydrogenase (GAPDH)**, a critical enzyme in the glycolytic pathway. - It also inhibits the **pyruvate dehydrogenase complex** (linking glycolysis to the TCA cycle) and TCA cycle enzymes like **α-ketoglutarate dehydrogenase**, thereby affecting multiple stages of cellular respiration. *Iodoacetate* - **Iodoacetate** is a potent inhibitor of the enzyme **glyceraldehyde-3-phosphate dehydrogenase (GAPDH)**. - It specifically alkylates the **cysteine residue** at the active site of GAPDH, preventing the conversion of glyceraldehyde-3-phosphate to 1,3-bisphosphoglycerate, thereby blocking glycolysis.

Q: Glucose oxidase converts glucose to?

Gluconic acid. ***Gluconic acid*** - **Glucose oxidase** specifically catalyzes the oxidation of glucose, producing **gluconic acid** and hydrogen peroxide. - This reaction forms the basis for many common **glucose diagnostic tests**, such as those used in blood glucose monitors. *Glucuronic acid* - **Glucuronic acid** is formed from the oxidation of glucose at carbon 6, typically through the **uronic acid pathway**. - It is known for its role in **detoxification** and conjugation reactions in the liver, not as a direct product of glucose oxidase. *Galactonic acid* - **Galactonic acid** is an oxidized form of galactose, a different monosaccharide from glucose. - Its formation is not associated with the action of **glucose oxidase**, an enzyme specific to glucose. *Iduronic acid* - **Iduronic acid** is a C5 epimer of glucuronic acid and is a common component of various **glycosaminoglycans** like dermatan sulfate and heparan sulfate. - It is not produced by the action of **glucose oxidase** on glucose.

Q: Urea & Kreb's cycle are linked at?

Fumarate. ***Fumarate*** - **Fumarate** is a key intermediate produced during the **urea cycle** when argininosuccinate is cleaved into arginine and fumarate. - This fumarate then enters the **Krebs cycle** (citric acid cycle) as an intermediate to be converted into malate and then oxaloacetate, thus linking the two cycles. *Arginine* - **Arginine** is an amino acid that participates in the urea cycle, serving as a precursor for the formation of urea. - While arginine is a part of the urea cycle, it does not directly enter the Krebs cycle or serve as its linking metabolite. *Ornithine* - **Ornithine** is another amino acid central to the urea cycle, being regenerated at the end of the cycle to combine with carbamoyl phosphate. - It is a carrier molecule for the nitrogen atoms, but it does not directly link to the Krebs cycle. *Oxaloacetate* - **Oxaloacetate** is a central intermediate in the Krebs cycle, and it can be a precursor for intermediates in the urea cycle (e.g., through aspartate). - However, it is not the direct molecule that links the two cycles in the direction of the urea cycle feeding into the Krebs cycle.

Q: What is the primary biochemical defect in alkaptonuria?

Deficiency of homogentisate 1,2-dioxygenase. ***Deficiency of homogentisate 1,2-dioxygenase*** - **Alkaptonuria** is an autosomal recessive disorder caused by the deficiency of **homogentisate 1,2-dioxygenase**, an enzyme in the **tyrosine degradation pathway**. - This deficiency leads to the accumulation of **homogentisic acid** in the body, which is excreted in urine and deposited in connective tissues. *Urine turns black immediately upon voiding* - While urine in alkaptonuria does **turn black**, it typically darkens upon **standing** and exposure to air, not immediately upon voiding. - The darkening is due to the oxidation of accumulated **homogentisic acid**. *FeCl3 test is negative* - The **ferric chloride (FeCl3) test** typically yields a **positive result** (transient green color) in the presence of homogentisic acid in the urine. - Therefore, a negative result would argue against a diagnosis of alkaptonuria. *Benedict's test is diagnostic for alkaptonuria* - **Benedict's test** is used to detect reducing sugars like glucose in urine and would not be used to diagnose alkaptonuria. - A positive Benedict's test in alkaptonuria is due to the reducing properties of homogentisic acid, but it is not specific or diagnostic.

Q: Which vitamin is involved in one-carbon transfer reactions?

Folic acid. ***Folic acid*** - **Folic acid (Vitamin B9)** is a crucial coenzyme in the form of **tetrahydrofolate (THF)**, which acts as a carrier of **one-carbon units**. - These one-carbon units are essential for various metabolic pathways, including the synthesis of **purines**, **thymidylate**, and the metabolism of several **amino acids**. *Pantothenic acid* - **Pantothenic acid (Vitamin B5)** is a precursor to **Coenzyme A (CoA)**, which plays a central role in fatty acid metabolism and the **Krebs cycle**, not one-carbon transfers. - CoA is involved in transferring **acetyl groups**, not one-carbon units. *Niacin* - **Niacin (Vitamin B3)** is a component of **NAD+** and **NADP+**, which are vital coenzymes in **redox reactions** (electron transfer), not one-carbon metabolism. - It functions primarily in **energy metabolism** as an electron carrier. *Thiamine* - **Thiamine (Vitamin B1)** is a coenzyme for **dehydrogenase reactions** and **transketolase** in the **pentose phosphate pathway**, which are involved in carbohydrate metabolism. - It does not directly participate in one-carbon transfer reactions.

Q: Which of the following is a lipotropic factor?

Methionine. ***Methionine*** - **Methionine** is an essential amino acid that serves as a precursor for **choline** and **creatine**, both of which play crucial roles in lipid metabolism and transport. - Lipotropic factors prevent or reverse the accumulation of **fat in the liver** by promoting the synthesis of **lipoproteins**, which package and transport fats from the liver to other tissues. *Sphingomyelin* - **Sphingomyelin** is a type of **sphingolipid**, a component of cell membranes and myelin sheaths, but it does not directly act as a lipotropic factor to prevent fatty liver. - While it's involved in cellular signaling and membrane structure, it does not directly facilitate the metabolism or transport of **hepatic triglycerides** in the same way as lipotropic agents. *Histidine* - **Histidine** is an essential amino acid involved in protein synthesis and the production of **histamine**, but it is not considered a primary lipotropic factor. - Its main roles are in **immune response** and **neurotransmission**, not in preventing fat accumulation in the liver. *Bilirubin* - **Bilirubin** is a waste product from the breakdown of **heme**, primarily from red blood cells. It is excreted by the liver. - It is known for its **antioxidant properties** but does not play a direct role as a lipotropic factor in lipid metabolism or in preventing **fatty liver**.

Q: Which of the following usually require a RNA intermediate for cloning/replication?

Retroviruses. ***Retroviruses*** - **All retroviruses require an RNA intermediate** for their replication cycle, making this the correct answer. - Retroviruses have an **RNA genome** that must be **reverse transcribed into DNA** by reverse transcriptase enzyme before integration into the host genome. - The integrated DNA (provirus) is then transcribed back to RNA, which serves both as mRNA for viral proteins and as genomic RNA for new virions. - Examples include **HIV, HTLV**, and other retroviruses that definitively use this RNA → DNA → RNA replication strategy. *Transposons* - This option is **too broad** to be correct. Only **retrotransposons** (Class I transposons) use RNA intermediates via a "copy-and-paste" mechanism involving reverse transcription. - However, **DNA transposons** (Class II) move by a "cut-and-paste" DNA mechanism **without any RNA intermediate**. - Since the question asks what "usually requires" RNA intermediate, and many common transposons (like bacterial Tn5, Tn10) are DNA transposons, this answer is imprecise. *Cosmids* - Cosmids are **hybrid cloning vectors** containing cos sites from bacteriophage lambda combined with plasmid sequences. - They replicate as **DNA plasmids** in bacteria using DNA-dependent DNA polymerase. - No RNA intermediate is involved in their replication mechanism. *Plasmids* - Plasmids are **extrachromosomal circular DNA molecules** that replicate independently within bacterial or yeast cells. - Replication occurs via **DNA-to-DNA synthesis** using DNA polymerase. - No RNA intermediate is required for plasmid propagation.

Q: In starvation, nitrogen is primarily carried from muscle to liver and kidney by which amino acid?

Alanine. ***Alanine*** - During starvation, muscles break down proteins, and the amino groups from these proteins are transferred to **pyruvate** to form **alanine** via the **glucose-alanine cycle (Cahill cycle)**. - **Alanine** is then released into the bloodstream and transported primarily to the **liver**, where its carbon skeleton can be used for **gluconeogenesis** and the amino group enters the urea cycle. - Note: While alanine is the primary carrier to the liver, **glutamine** is the main nitrogen carrier to the kidney. However, among the given options, alanine is unequivocally the correct answer. *Aspartic acid* - While aspartate is involved in amino group transfer and is a crucial component of the **urea cycle**, it is not the primary carrier for inter-organ nitrogen transport from muscle to liver during starvation. - Its role is more localized within the liver for the urea cycle rather than as a transport amino acid. *Glycine* - Glycine plays roles in various metabolic pathways, including synthesis of heme, purines, and conjugation reactions, but it is not the primary amino acid for carrying nitrogen from muscle to liver during starvation. - Its small size and simple structure make it less suitable for efficient nitrogen transport compared to alanine. *Asparagine* - Asparagine has a minor role in nitrogen transport but is not the primary carrier during starvation. - It is synthesized from **aspartate** and ammonia and is typically involved in protein synthesis and nitrogen storage in some tissues.

Q: What is the role of nonsense codons in protein synthesis?

Termination of protein synthesis. ***Termination of protein synthesis*** - **Nonsense codons**, also known as **stop codons** (UAA, UAG, UGA), signal the end of translation. - When a ribosome encounters a nonsense codon, it binds **release factors** instead of an aminoacyl-tRNA, leading to the dissociation of the polypeptide chain. *Elongation of the polypeptide chain* - **Elongation** involves the sequential addition of amino acids to the growing polypeptide chain, guided by sense codons. - Nonsense codons do not code for any amino acid and thus do not contribute to chain elongation. *Pre-translational modification of proteins* - **Pre-translational modifications** refer to events like protein folding and disulfide bond formation that occur as the polypeptide is being synthesized. - Nonsense codons are involved in halting the synthesis, not in modifying the protein. *Initiation of protein synthesis* - **Initiation** of protein synthesis begins at the **start codon** (AUG), which codes for methionine. - Nonsense codons are distinct from the start codon and fulfill a different role in the translation process.

Question 1

Which of the following pairs of compounds has the highest standard reduction potential?

Accepted Answer

Fe³⁺/Fe²⁺

Answer

NADH/NAD+

Answer

Succinate/Fumarate

Answer

Ubiquinone/Ubiquinol

Question 2

Which of the following substances does not inhibit glycolysis?

Accepted Answer

Fluoroacetate

Answer

Fluoride

Answer

Arsenite

Answer

Iodoacetate

Question 3

Glucose oxidase converts glucose to?

Accepted Answer

Gluconic acid

Answer

Glucuronic acid

Answer

Galactonic acid

Answer

Iduronic acid

Question 4

Urea & Kreb's cycle are linked at?

Accepted Answer

Fumarate

Answer

Arginine

Answer

Ornithine

Answer

Oxaloacetate

Question 5

What is the primary biochemical defect in alkaptonuria?

Accepted Answer

Deficiency of homogentisate 1,2-dioxygenase

Answer

FeCl3 test is negative

Answer

Urine turns black immediately upon voiding

Answer

Benedict's test is diagnostic for alkaptonuria

Question 6

Which vitamin is involved in one-carbon transfer reactions?

Accepted Answer

Folic acid

Answer

Pantothenic acid

Answer

Niacin

Answer

Thiamine

Question 7

Which of the following is a lipotropic factor?

Accepted Answer

Methionine

Answer

Sphingomyelin

Answer

Histidine

Answer

Bilirubin

Question 8

Which of the following usually require a RNA intermediate for cloning/replication?

Accepted Answer

Retroviruses

Answer

Cosmids

Answer

Plasmids

Answer

Transposons

Question 9

In starvation, nitrogen is primarily carried from muscle to liver and kidney by which amino acid?

Accepted Answer

Alanine

Answer

Glycine

Answer

Aspartic acid

Answer

Asparagine

Question 10

What is the role of nonsense codons in protein synthesis?

Accepted Answer

Termination of protein synthesis

Answer

Elongation of the polypeptide chain

Answer

Pre-translational modification of proteins

Answer

Initiation of protein synthesis

NEET-PG 2012 — Biochemistry